BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A02LP1|AL429829
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1035 1554 0.0
>3x_Contig1035
Length = 4175
Score = 1554 bits (784), Expect = 0.0
Identities = 855/869 (98%), Gaps = 10/869 (1%)
Strand = Plus / Plus
Query: 1 tgttatcgtccaacatggtcactgtaccatccgactcgatatcagaaacaatacctgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgttatcgtccaacatggtcactgtaccatccgactcgatatcagaaacaatacctgtct 839
Query: 61 ttggctcttcaccagtagtatcaataacggtaaattcttcacctaaatcgacgaaaacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ttggctcttcaccagtagtatcaataacggtaaattcttcacctaaatcgacgaaaacgt 899
Query: 121 taccaaataacccacgggtctccgtagaaatgaaaccgataccgtgagagtgtgtatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 taccaaataacccacgggtctccgtagaaatgaaaccgataccgtgagagtgtgtatact 959
Query: 181 cattcaacttcaccttttcttctagtgaaatcgtgtctgtcacaacaactacttggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 cattcaacttcaccttttcttctagtgaaatcgtgtctgtcacaacaactacttggaatt 1019
Query: 241 cagacaattgtgacacgtcttctagcccctctagcaccttcactggcacgtatgagttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 cagacaattgtgacacgtcttctagcccctctagcaccttcactggcacgtatgagttta 1079
Query: 301 attcggctaattttgcctgtgatactttatctctagcttgcccaatatcttgttctgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 attcggctaattttgcctgtgatactttatctctagcttgcccaatatcttgttctgaca 1139
Query: 361 ggaaaaactgcgtagaaagatcctgtaaagcg-acagcgc-ttggatcataaagggttaa 418
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 1140 ggaaaaactgcgtagaaagatcctgtaaagcgcacagcgcattggatcataaagggttaa 1199
Query: 419 agacttaacaccggcc--aagacaa-cgttcttggcaatct-cgacacctaaacctttta 474
|||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 1200 agacttaacaccggcccgaagacaagcgttcttggcaatctgcgacacctaaacctttta 1259
Query: 475 acccaatgatcaaaa-cgttcgaatgttgcatct--ttaacatcgcttctttac-ctaat 530
||||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||
Sbjct: 1260 acccaatgatcaaaagcgttcgaatgttgcatcttgtgaacatcgcttctttacgctaat 1319
Query: 531 acgtacaattgacgagagttcaagctctcgtcaatntcttcgccatcaaccttaatattc 590
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1320 acgtacaattgacgagagtacaagctctcgtcaatttcttcgccatcaaccttaatattc 1379
Query: 591 gtcatatctgatactaacttgtgatgcaatgtgatcaaaatgaacgaacggttcacttct 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 gtcatatctgatactaacttgtgatgcaatgtgatcaaaatgaacgaacggttcacttct 1439
Query: 651 tgttgctattgttgttttaaggaaactggtttgtagttgtttataggttgttggccttat 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 tgttgctattgttgttttaaggaaactggtttgtagttgtttataggttgttggccttat 1499
Query: 711 taattcggtttttgccactttgggttcggtcacgtgagtgtttgagttttcagtcacgtg 770
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1500 taattcggtttttgccactttgggttcggtcacgtgagtggttgagttttcagtcacgtg 1559
Query: 771 atatgaatggaagatgttcgaatacaatacgacagaaagtgaagcatttgaggtgatagt 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 atatgaatggaagatgttcgaatacaatacgacagaaagtgaagcatttgaggtgatagt 1619
Query: 831 atggttccaagagcccatataaattgttt 859
|||||||||||||||||||||||||||||
Sbjct: 1620 atggttccaagagcccatataaattgttt 1648
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5960
Number of Sequences: 1807
Number of extensions: 5960
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)